spikeinterface
0.95.0

Contents:

  • Overview
  • Installation
  • Getting started tutorial
  • Modules documentation
  • Modules tutorials
    • Core tutorials
    • Extractors tutorials
    • Preprocessing tutorial
    • Sorters tutorials
    • Postprocessing tutorial
    • Quality metrics tutorial
    • Comparison tutorials
    • Widgets tutorials
      • Core tutorials
      • Extractors tutorials
      • Preprocessing tutorial
      • Sorters tutorials
      • Postprocessing tutorial
      • Quality metrics tutorial
      • Comparison tutorials
      • Widgets tutorials
        • RecordingExtractor Widgets Gallery
        • SortingExtractor Widgets Gallery
        • Waveforms Widgets Gallery
        • Peaks Widgets Gallery
  • Compatible Technology
  • Containerized Sorters
  • Installing Spike Sorters
  • Viewers
  • Contribute
  • API
  • Release notes
  • Contact Us
spikeinterface
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  • SortingExtractor Widgets Gallery
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Note

Click here to download the full example code

SortingExtractor Widgets Gallery¶

Here is a gallery of all the available widgets using SortingExtractor objects.

import matplotlib.pyplot as plt

import spikeinterface.extractors as se
import spikeinterface.widgets as sw

First, let’s create a toy example with the extractors module:

recording, sorting = se.toy_example(duration=100, num_channels=1, seed=0, num_segments=1)

plot_rasters()¶

w_rs = sw.plot_rasters(sorting)
plot 2 sort gallery

plot_isi_distribution()¶

w_isi = sw.plot_isi_distribution(sorting, window_ms=150.0, bin_ms=5.0)
plot 2 sort gallery

plot_autocorrelograms()¶

w_ach = sw.plot_autocorrelograms(sorting, window_ms=150.0, bin_ms=5.0, unit_ids=[1, 2, 5])
1, 2, 5

plot_crosscorrelograms()¶

w_cch = sw.plot_crosscorrelograms(sorting, window_ms=150.0, bin_ms=5.0, unit_ids=[1, 2, 5])

plt.show()
1, 2, 5

plot_presence()¶

w_pr = sw.plot_presence(sorting)

plt.show()
plot 2 sort gallery

Total running time of the script: ( 0 minutes 1.622 seconds)

Download Python source code: plot_2_sort_gallery.py

Download Jupyter notebook: plot_2_sort_gallery.ipynb

Gallery generated by Sphinx-Gallery

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© Copyright 2021, Alessio Paolo Buccino, Cole Hurwitz, Jeremy Magland, Matthias Hennig, Samuel Garcia. Revision c9df65b7.

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